@TWG
Hey, don't diss Apple! Strictly forbidden!!! 😁
Actually, the Macbook Pro, and even the puny little Mac mini, is just perfect for music production - but in music production you connect via Firewire or USB, preferably Firewire for pro grade satellite equipment (soundcards, etc.) And you do not use the on-board "iPod and plastic speakers" intended DAC circuitry.
The analog minijack out is not useful for much other than earbuds, really. The DAC circuitry inside is not very good, and the unit is prone to noise from the power supply. (Jitter is substantially lower when the laptop runs on battery, for instance.)
The amp's in the BL3s are very sensitive, and a build-up of static electricity will produce those pops. The level at which you have to set the volume (very low) tells you how sensitive those speakers are. You could also be getting pops from the minijack being moved slightly in the connecting jack.
As Alex says - it makes absolutely no sense to have speakers as good as the BL3s, and then connecting to that minijack. There are less expensive DACs out there, but the advantage with a unit such as the DacMagic is that you can connect a variety of sources to it, and in this particular instance that you can use either the toslink optical or USB from the Mac.
I use Firewire from my Mac mini to my soundcard, which is connected to my BL5s - with Firewire, you can slave the computer to the soundcard, which means that the computer will adjust to any settings in the soundcard (sample rate, etc), without my having to do so in the Audio MIDI Setup application. Also, Firewire has very good jitter-performance (which is why it is preferred by the music industry). But an FW connection is not crucial with the BL3s.
The main reason why you want to put something between your Mac and the BL3s is to protect the speakers; a just as important reason is to get the sound they are capable of out of them. If B&O was smart, it would long ago have built a DAC intended to be used between computers and their active speakers, to be sold as a package. The next big wave in audiophile systems is going to be active speakers, and it's kind of a mystery why B&O isn't exploiting it better, given their total head start.